Find mutual nearest neighbors pairs

Source: R/utils_findMNN.R

Find mutual nearest neighbors pairs

mnn_adjacent(
  batch.list,
  d = 50,
  BSPARAM = ExactParam(),
  BPPARAM = SerialParam()
)

Arguments

batch.list

list of gene expression.

d

dimension of PCA.

BSPARAM

parallel.

BPPARAM

parallel.

Value

a sparse matrix - adjacent matrix